Practical Jalview Course at University of Basel
A one day course hosted by the Schwede group, based in the Biozentrum at the University of Basel.
The program for this course is as follows:
Session 1. Introduction to Jalview.
- starting the application
- importing alignments
- basic editing and creating figures.
Recommended for anyone not familiar with working with sequences and sequence alignments, or has never edited or published alignments with Jalview
Session 2. Alignment and alignment analysis.
creating sequence alignments
importing and calculating trees
tree based alignment analysis
viewing sequence annotation
secondary structure prediction
Recommended for anyone wanting to use Jalview to access multiple alignment and alignment analysis software or for function analysis