Install via Package Managers or Executable Jar

You can install Jalview in a number of ways other than the main desktop installer. You may find one of the methods below suits your needs better, although some peripheral functionality or integration with your operating system may be lost. See the notes for details.

Type InstallerInstallation/Usage notes
conda install -c bioconda jalview
Installing with Anaconda
brew install --cask jalview
Installing with Homebrew
 Jalview 2.11.3.3 Executable JAR (.jar) (46.0MB)
SHA256: 0709113a1e7ea8d955fcb083543ed729c264075f9c0509d11c5e61f44572dc7e
Using the JAR file

If you want to test features scheduled for the next release of Jalview, please install the Jalview Test app.

If you are interested in trying out features currently in development, please install the Jalview Develop app.


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Thanks to ej-technologies for granting a free install4j license to the Jalview Open Source Project. Jalview's desktop installers were built with the install4j multi-platform installer builder and Gradle.