Jalview 2.6.1

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WARNING! Downloading this JVL file might automatically switch your Jalview installation to version 2.6.1 (without auto-updates).

To revert back to the Jalview RELEASE channel, please visit the Using the Jalview Launch file page.

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New Features

Application

  • New warning dialog when the Jalview Desktop cannot contact web services
  • JABA service parameters for a preset are shown in service job window
  • JABA Service menu entries reworded

Issues Resolved

  • Modeller PIR IO broken - cannot correctly import a pir file emitted by Jalview
  • Existing feature settings transferred to new alignment view created from cut’n’paste
  • Improved test for mixed amino/nucleotide chains when parsing PDB files
  • Consensus and conservation annotation rows occasionally become blank for all new windows
  • Exception raised when right clicking above sequences in wrapped view mode

Application

  • multiple multiply aligned structure views cause cpu usage to hit 100% and computer to hang
  • Web Service parameter layout breaks for long user parameter names
  • Jaba service discovery hangs desktop if Jaba server is down