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Jalview is the fifth patch release in the 2.11.1 series.

New Features


  • Update library dependency: Log4j 2.16.0 (was log4j 1.2.x).


  • Updated building instructions

Issues Resolved

  • Occupancy calculation is incorrect for alignment columns with over -1+2^32 gaps (breaking filtering and display)
  • Caps on Hi-DPI scaling to prevent crazy scale factors being set with buggy window-managers (linux only)


  • Fixed non-fatal gradle errors during build