Jalview 2.1

Version Date:
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New Features

  • MAFFT Multiple Alignment in default Web Service list
  • DAS Feature fetching
  • Hide sequences and columns
  • Export Annotations and Features
  • GFF file reading / writing
  • Associate structures with sequences from local PDB files
  • Add sequences to exisiting alignment
  • Recently opened files / URL lists
  • Applet can launch the full application
  • Applet has transparency for features (Java 1.2 required)
  • Applet has user defined colours parameter
  • Applet can load sequences from parameter “sequencex

Issues Resolved

  • Redundancy Panel reinstalled in the Applet
  • Monospaced font - EPS / rescaling bug fixed
  • Annotation files with sequence references bug fixed