Many thanks also to Dr. Jim Procter @foreveremain, Dr. Stuart MacGowan @stuartmac44, Javier Utges-Sanchez @JavierUtges and other members of the Barton Group towards the development of this video.
This Jalview feature uses 3D Beacons at EMBL-EBI @emblebi to access structural data. Core development is in the Barton Group @bartongrp headed by Professor Geoff Barton @gjbarton in @UoDLifeSciences with funding from Wellcome Trust @wellcometrust and BBSRC @BBSRC.
A new Jalview training video has landed – the first from the newest member of Jalview's core team: Khadija. This video covers working in Jalview with 3D structures from PDB/AlphaFold/SwissModel and more in their evolutionary context through alignment. https://youtube.com/watch?v=ZBDZdeTF0og&t=55s…
Our friends at @PDBeurope noticed an issue that prevents Jalview automatically discovering 3D structures for a sequence using its name. This will be fixed in the next data release: eta 27th Nov 2024. Until then you can still use the 3D beacons search button to discover structures
Thank you to all of the @jalview users who find the software helpful in their research and cite it in their papers. Citations are important for us to help make the case for continued funding for the core development team @bartongrp@UoDLifeSciences
Monday TO DOs:
Buy milk
Call grandma
Sign up for EMBL's drop-in session!
Join us tomorrow at 4pm CET for info on our “Unfold Your World” project! Get tips on submitting your protein-inspired art & a sneak peek at the private view. Sign up here:
Exciting news! Jalview 2.11.4 has been launched.
→ We've added new capabilities including enhanced protein secondary structure annotations and PASiMap.
→ For full specifications, see: https://jalview.org/development/archive/Version-2_11_4_0/…
Jalview’s alignment and other web services will be unavailable for up to 35 hours from 7am BST (UTC+1) on Saturday 7th September, 2024 through to Sunday 8th September, 2024 at 6pm BST. We are sorry for any inconvenience this may cause.
Did you know 'Multiple Sequence Alignment and Analysis with Jalview' is one of our top training videos?
With more than 24,000 unique views, this is your go-to video to understanding Jalview's sequence alignment capabilities! Link in the comments.