Batches of protein sequences can be submitted to the JPred server for protein secondary structure prediction, with the option to receive a copy of the results via email. 馃敆 www.youtube.com/watch?v=yLga... 馃敆 www.compbio.dundee.ac.uk/jpred/help.s... 馃摐 academic.oup.com/nar/article/...
馃帺 Sequences can be hidden in Jalview, allowing specific subsets within the alignment to be focused on and analysed. Hiding sequences improves the readability of large MSAs and the presentation of results for publication. 馃敆 www.youtube.com/watch?v=9s7W... 馃敆 www.jalview.org/tutorial/exe...
馃摵 Powering off your tech devices for the summer? Learning never stops! You can watch key bioinformatics lectures by Prof. Geoff Barton on the fundamentals of MSA analysis on your TV instead. Plus, a free 1 hour Jalview masterclass by Jalview Co-ordinator, Dr. Jim Procter. 馃敆 Links in comments.
馃摤 Protein and nucleotide structures can be imported into Jalview, mapped on to MSA sequences and visualised in 3D. Our latest training video summarises some of the structure import options available to users. 鈻讹笍 Watch it here: www.youtube.com/watch?v=xFUu...
鉁傦笍 Sequence redundancy can create bias and slow down the analysis of alignments. With Jalview, you can quickly reduce redundancy by filtering sequences based on percentage identity. Just adjust the threshold slider to your chosen cutoff! Read more: www.jalview.org/tutorial/exe...