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Looking for the 'Launch Jalview' buttons ?

You need to download an installer to run Jalview 2.11.
You can still use webstart to access old versions of Jalview in the version archive

The old Jalview had font size and page orientation settings for its Postscript output. Where have they gone?

Jalview now exports images and graphics using the same settings as the alignment display window. Just set the font and font size, and the layout style (normal or wrapped) using the View menu.
If you do want to specify portrait or landscape, you could use the File→Print dialog box, and redirect the output to a file.

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