[Jalview-discuss] Jalview Development with NetBeans [ was (no subject)]

Jim Procter jprocter at compbio.dundee.ac.uk
Fri Mar 26 09:56:30 GMT 2010


Hi Elham - it sounds like you have managed to sort most of the issues 
with building Jalview with Netbeans.
On 26/03/2010 07:28, elham gharazi wrote:
> The problem is that I cant connect to any URLs, I get this error:
>
> java.net.SocketTimeoutException: connect timed out
>         at java.net.PlainSocketImpl.socketConnect(Native Method)
Can you provide a complete stacktrace ?  And is this for all URLs ? (ie 
via the sequence fetcher, DAS registry, DAS annotation, and webservices).
> meanwhile I can connect to webservices using the java web start and 
> running the jar file
>
> Do you have any idea what is the cause of this problem?
Difficult to say. Its possible that your machine's firewall is 
preventing connections from any process managed by NetBeans.
>
> I have to add that in my project I havent added any special libraries 
> to conflict with the
> currently jalview's libraries
ok. good to know.

Jim.

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