[Jalview-discuss] proper way to add a new color scheme

[Jim Procter]

Dear Huseyin.

On 09/12/2009 08:04, Huseyin Kaya wrote:
> Hi everyone,
>
> I was in need for a color scheme that is very similar to "Percentage
> Identity".
> But it should only paint the backgrounds of bases different than
> consensus with the color pink.
> It is very simple in the sense that it doesn't require threshold values.
>
> I couldn't find a way to do this from menus including "User defined"
> color scheme menu.
>    
Jalview doesn't allow you to modify the consensus colourscheme at the 
moment. However, we have had a few requests regarding more configuration 
options for these colourschemes - I'll add your name to the list of 
testers, if you'd like!.

Jim.