[Jalview-discuss] problems with linking structure of the modelled protein with sequence (workaround)

[Jim Procter]

Oops.

I forgot to finish this email.

James Procter wrote:
<snip>
> A quick work around is to add in a

.. dummy line in the PDB file that you are trying to read in:

HEADER                                              9mdlXX

This will ensure the (broken) parser puts in a valid string into the PDB 
ID variable, and so avoiding the exception that leads to Jalview 
thinking it cannot read this file as a PDB file.

cheers.
Jim

-- 
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J. B. Procter (VAMSAS Project) Barton Bioinformatics Research Group
Phone/Fax:+44(0)1382 388734/345764  http://www.compbio.dundee.ac.uk