Jalview is free to end-users because of support from the UK's BBSRC and The Wellcome Trust

If you would like to see Jalview continue to be available then please take a few minutes to write us a support letter saying how you use Jalview in your research/teaching.

Write as a PDF including your institution's heading and send to:
support_jalview@bartongroup.org by Friday 19th October 2018.

Thank you all those who have already written such nice letters!

Fuzzy fonts in the alignment view on OSX Mojave (10.14.x)

On OSX Mojave, you may notice that sequences and IDs in the Jalview alignment window are hard to read. To fix this, first:

1. Save your work and shut down Jalview

2. Open a Terminal window (use spotlight or the Launcher and type 'Terminal' to locate the Terminal App), and type:


  defaults write -g CGFontRenderingFontSmoothingDisabled -bool NO

3. Start Jalview again and load an alignment to check that the fonts are now legible.

Jalview 2.10.5

Jalview 2.10.5 is a minor release that includes critical patches for users working with Ensembl, RNA secondary structure annotation, and those running Jalview on OSX with Java 10.

Jalview 2.10.4

This minor release is the last in the 2.10 series. It includes critical patches for maintaining access to public web services, compatibility with Java 10 on OSX, efficiency improvements a revised 3D structure chooser and more reliable SIFTS sequence-structure mappings.

Multiple Sequence Alignment with Jalview and Protein Structure and Function Modelling

Date: Monday 14th to Tuesday 15th May 2018
Time: 9.00 to 17.00
Location: MSTC, Sherrington Building, University of Liverpool, L69 3BX

This two day hands-on training course is aimed at students and researchers who want to gain practical understanding of the tools and approaches for protein sequence, structure and function prediction and analysis.


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