Jalview Desktop Downloads
Please download an installer or archive for your platform from the links below. Once installed, the Jalview application will keep itself up to date.
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Jalview executable .jar file
This requires existing Java installation and can be launched via java -jar jalview-all-2.11.1.0-j1.8.jar |
View all platforms
Other ways to install Jalview 
To see what's new, view the Jalview 2.11.1.0 Release Notes.
If you need the source, then please download the Jalview 2.11.1.0 Source Tarball.
Running a specific version of Jalview
If you need to install a specific version and have an existing Java installation then we recommend downloading the Jalview Executable Jar (see table above). The Version Archive provides links to builds for earlier versions. Alternatively, up to date versions of Jalview designed for command line use are also available via conda and homebrew.
Install via Conda
A Jalview conda package is also available (tested on OSX and Linux) thanks to the great folk over at BioConda 
To install via conda, first download Miniconda for your platform.
Then: open a terminal and type:
conda config --add channels defaults conda config --add channels bioconda conda config --add channels conda-forge conda install jalview
Thanks to ej-technologies for granting a free install4j license to the Jalview Open Source Project. Jalview's installers were built with the install4j multi-platform installer builder and gradle.
