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You need to download an installer to run Jalview 2.11.
You can still use webstart to access old versions of Jalview in the version archive

Archive of Previous Jalview Releases

The table below lists archived source and builds for previous jalview releases. There are two sections - versions of Jalview released prior to 2019 (before 2.11.0) are listed with both their original installation files, and - where possible, a Jalview Launch file that allows that version to be launched with the latest Jalview Dekstop App. Versions of jalview 2.11 and later are made available via Jalview Launch Files and stand-alone jars.

We don't support old versions of Jalview, and there may be problems running older versions on modern systems. If you've got data that only works with an old version of JalviewLite or the Jalview Desktop, or are trying to do something that doesn't work on the new version, however, then it could be that you've found a bug!.

Jalview 2.11.0 Jalview 2.11.0 Launch File 2.11.0 Single Executable Jar Source Tarball for Jalview 2.11.0

Versions of Jalview prior to 2019

Jalview 2.10.5 Webstart Jalview 2.10.5 InstallAnywhere Jalview 2.10.5 Jalview 2.10.5 Applet (Unsupported) Source Tarball for Jalview 2.10.5
Jalview 2.10.4b1 Webstart Jalview 2.10.4b1 InstallAnywhere Jalview 2.10.4b1 Jalview 2.10.4b1 Applet (Unsupported) Source Tarball for Jalview 2.10.4b1
Jalview 2.10.4 Webstart Jalview 2.10.4 InstallAnywhere Jalview 2.10.4 Jalview 2.10.4 Applet (Unsupported) Source Tarball for Jalview 2.10.4
Jalview 2.10.3b1 Webstart Jalview 2.10.3b1 InstallAnywhere Jalview 2.10.3b1 Jalview 2.10.3b1 Applet (Unsupported) Source Tarball for Jalview 2.10.3b1
Jalview 2.10.3 Webstart Jalview 2.10.3 InstallAnywhere Jalview 2.10.3 Jalview 2.10.3 Applet (Unsupported) Source Tarball for Jalview 2.10.3
Jalview 2.10.2b2 Webstart Jalview 2.10.2b2 InstallAnywhere Jalview 2.10.2b2 Jalview 2.10.2b2 Applet (Unsupported) Source Tarball for Jalview 2.10.2b2
Jalview 2.10.2b1 Webstart Jalview 2.10.2b1 InstallAnywhere Jalview 2.10.2b1 Jalview 2.10.2b1 Applet Source Tarball for Jalview 2.10.2b1
Jalview 2.10.2 Webstart Jalview 2.10.2 InstallAnywhere Jalview 2.10.2 Jalview 2.10.2 Applet Source Tarball for Jalview 2.10.2
Jalview 2.10.1 Webstart Jalview 2.10.1 InstallAnywhere Jalview 2.10.1 Jalview 2.10.1 Applet Source Tarball for Jalview 2.10.1
Jalview 2.10.0 Webstart Jalview 2.10.0 InstallAnywhere Jalview 2.10.0 Jalview 2.10.0 Applet Source Tarball for Jalview 2.10.0
Jalview 2.9 Webstart Jalview 2.9 InstallAnywhere Jalview 2.9 Jalview 2.9 Applet Source Tarball for Jalview 2.9
Jalview 2.8.2b1 Webstart Jalview 2.8.2b1 InstallAnywhere Jalview 2.8.2b1 Jalview 2.8.2b1 Applet Source Tarball for Jalview 2.8.2b1
Jalview 2.8.2 Webstart Jalview 2.8.2 InstallAnywhere Jalview 2.8.2 Jalview 2.8.2 Applet Source Tarball for Jalview 2.8.2
Jalview 2.8.1 Webstart Jalview 2.8.1 InstallAnywhere Jalview 2.8.1 Jalview 2.8.1 Applet Source Tarball for Jalview 2.8.1
Jalview 2.8.0b1 Webstart Jalview 2.8.0b1 InstallAnywhere Jalview 2.8.0b1 Jalview 2.8.0b1 Applet Source Tarball for Jalview 2.8.0b1
Jalview 2.8 Webstart Jalview 2.8 InstallAnywhere Jalview 2.8 Jalview 2.8 Applet Source Tarball for Jalview 2.8
Jalview 2.7 Webstart Jalview 2.7 InstallAnywhere Jalview 2.7 Jalview 2.7 Applet Source Tarball for Jalview 2.7
Jalview 2.6.1 Webstart Jalview 2.6.1 InstallAnywhere Jalview 2.6.1 Jalview 2.6.1 Applet Source Tarball for Jalview 2.6.1
Jalview 2.6 Webstart Jalview 2.6 InstallAnywhere Jalview 2.6 Jalview 2.6 Applet Source Tarball for Jalview 2.6
Jalview 2.5.1 Webstart Jalview 2.5.1 InstallAnywhere Jalview 2.5.1 Jalview 2.5.1 Applet Source Tarball for Jalview 2.5.1
Jalview 2.5 Webstart Jalview 2.5 InstallAnywhere Jalview 2.5 Jalview 2.5 Applet Source Tarball for Jalview 2.5
Jalview 2.4.0b2 Webstart Jalview 2.4.0b2 InstallAnywhere Jalview 2.4.0b2 Jalview 2.4.0b2 Applet Source Tarball for Jalview 2.4.0b2
Jalview 2.4 Webstart Jalview 2.4 InstallAnywhere Jalview 2.4 Jalview 2.4 Applet Source Tarball for Jalview 2.4
Jalview 2.3 Webstart Jalview 2.3 InstallAnywhere Jalview 2.3 Jalview 2.3 Applet Source Tarball for Jalview 2.3